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A web platform for cryo-EM data analysis via cloud computing at the San Diego Supercomputer Center
  • About
    • What is COSMIC2?
    • Development team
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  • Gateway tools
    • Structure prediction
      • AlphaFold2
      • AlphaFold multimer
      • Colabfold
      • OmegaFold
      • IgFold
    • Single particle cryo-EM
      • RELION-3.1
        • RELION 2D classification
        • RELION 3D Initial Model
        • RELION 3D classification
        • RELION 3D Refinement
        • RELION Multibody Refinement
      • SPHIRE
        • crYOLO
        • ISAC 2D classification
      • cryoDRGN
      • DeepEMhancer
      • LocBFactor / LocSpiral / LocOccupancy
        • LocSpiral
        • LocBfactor
        • LocBfactor Estimation
        • LocOccupancy
      • Conversion software
      • Efficiency
      • Align Projections
    • Cryo-electron tomography
      • IsoNet
  • Learn
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    • cryoSPARC stack upload
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      • File transfer using Globus
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Conversion software for cryo-EM

pyem – csparc2star.py

In order to convert cryoSPARC output file (.cs) to STAR files for RELION, the csparc2star.py software from pyem by Daniel Asarnow is available.

Learn more how to use this tool on COSMIC².

Recent Posts

  • New tool: Isonet refine (cryo-ET!)
  • So many protein structure prediction tools – what is the difference?
  • Uploading cryoSPARC-extracted particle stacks
  • New tool added: AlphaFold2
  • New tool added: crYOLO

COSMIC² is supported by the National Science Foundation under Award Number 1759826.
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